Artificial intelligence publications
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Call for an enzyme genomics initiative
I propose an Enzyme Genomics Initiative, the goal of which is to obtain at least one protein sequence for each enzyme that has previously been characterized biochemically.
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Identifying Terrorist Activity with AI Plan Recognition Technology
We describe the application of plan recognition techniques to support human intelligence analysts in processing national security alert sets by automatically identifying the hostile intent behind them. Identifying the intent…
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The E. coli EcoCyc Database: No Longer Just a Metabolic Pathway Database
No longer restricted to metabolic pathways, this curated database includes data on genomics, molecular biology, and more.
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Computational analysis of Plasmodium falciparum metabolism: Organizing genomic information to facilitate drug discovery
We have constructed PlasmoCyc, a PGDB for Plasmodium falciparum 3D7, using its annotated genomic sequence. We also add 956 additional annotations to proteins annotated as “hypothetical” using the GeneQuiz annotation system.
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Interactive Execution Monitoring of Agent Teams
We describe a monitoring framework for integrating many domain-specific and task-specific monitoring techniques and then using the concept of value of an alert to avoid operator overload.
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Introduction to a multiagent perspective
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The MetaCyc Metabolic Pathway Database
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Using Transformations to Improve Semantic Matching
In this paper, we describe how transformations can augment existing semantic approaches to further improve matching.
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Execution Monitoring in Agent Teams
We characterize the domain-independent challenges posed by this problem, and describe how properties of domains influence the challenges and their solutions.
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HpyCyc: Helicobacter pylori Pathway/Genome Database
A Pathway/Genome Database for Helicobacter pylori is available at URL BioCyc.org. The database integrates the full genome of H. pylori with its computationally predicted metabolic pathways.
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Mixed-initiative Planning in PASSAT
We present the novel application of a general-purpose knowledge-based system, SHAKEN, to the specific task of acquiring knowledge for military Course of Action (COA) analysis.
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A Mixed-initiative Framework for Robust Plan Sketching
We present a formal framework for robust plan sketching that defines key concepts and algorithms for interpreting and repairing plan sketches for two classes of problems.