Publications
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Proteolytic Fingerprinting of Complex Biological Samples Using Combinatorial Libraries of Fluorogenic Probes
This unit describes a protocol to map the global proteolytic substrate specificities of complex biological samples using a concise combinatorial library of internally quenched fluorogenic peptide probes (IQFPs).
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EcoCyc: Fusing Model Organism Databases with Systems Biology
Updates to EcoCyc content continue to improve the comprehensive picture of E. coli biology. The utility of EcoCyc is enhanced by new tools available on the EcoCyc web site, and…
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Discovery and Pharmacological Evaluation of a Diphenethylamine Derivative (HS665), a Highly Potent and Selective Kappa Opioid Receptor Agonist
Here we report on the design, synthesis, and biological characterization of novel κ opioid (KOP) receptor ligands of diphenethylamines.
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Solving inverse configuration space problems by adaptive sampling
We show that solutions to such problems may be efficiently approximated directly in the 6D configuration space SE(3) of relative motions by adaptive sampling.
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Unbiased learning of controversial topics
We designed a user study to analyze various factors that may help in learning about a controversial topic without bias.
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BiasTrust: teaching biased users about controversial topics
Abstract Deciding whether a claim is true or false often requires understanding the evidence supporting and contradicting the claim. However, when learning about a controversial claim, human biases and viewpoints…
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Micro-fluidic based detection platform for rapid pathogen characterization in water
In order to achieve more timely assessment of water quality, PARC is developing a compact and robust platform for rapid pathogen identification and quantitation in water.
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GenoDroid: are privacy-preserving genomic tests ready for prime time?
In this paper, we take this line of work a step further by investigating real-world practicality and usability of (as well as interest in) some of these methods.
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Back to the future of work: informing corporate renewal
This paper describes the results of a multi-year ethnographic study of how knowledge workers integrate new technology into their work practices.
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Innovative algae dewatering technology
This paper describes a novel technology for dewatering of bio materials, such as algae, for biofuel production and other applications.
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Multimedia Event Recounting with Concept Based Representation
We conduct a pilot study of the multimedia event recounting problem, which answers the question why this video is recognized as this event, i.e. what evidences this decision is made…
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Long-Range Pedestrian Detection Using Stereo and a Cascade of Convolutional Network Classifiers
In this paper, we present a system for detecting pedestrians at long ranges using a combination of stereo-based detection, classification using deep learning, and a cascade of specialized classifiers that…